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Structure Checker User's Guide
Introduction
Structure Checker in a Nutshell
Getting Started
Structure Checker Concepts
Checkers
Fixers
Structure Checking of Molecules
Working with Structure Checker
Checker List
Abbreviated Group
Absent Chiral Flag
Absolute Stereo Configuration
Alias
Aromaticity Error
Atom Map
Atom Query Property
Atom Value
Atropisomer
Attached Data
Bond Angle
Bond Length
Chiral Flag
Chiral Flag Error
Circular R-group Reference
Coordination System Error
Covalent Counterion
Crossed Double Bond
Double Bond Stereo Error
E/Z Double Bond
Empty Structure
Explicit Hydrogen
Explicit Lone Pairs
Isotope
Metallocene Error
Missing Atom Map
Missing R-group Reference
Molecule Charge
Multicenter
Multicomponent
Multiple Stereocenter
OCR Error
Overlapping Atoms
Overlapping Bonds
Pseudo Atom
Query Atom
Query Bond
Racemate
Radical
Rare Element
R-atom
Reacting Center Bond Mark
Reaction Map Error
Relative Stereo
R-group Attachment Error
R-group Reference Error
Ring Strain Error
Solvent
Star Atom
Stereo Care Box
Stereo Inversion Retention Mark
Straight Double Bond
Substructure
Three Dimension (3D)
Unbalanced Reaction
Unused R-group Reference
Valence Error
Valence Property
Wedge Error
Wiggly Bond
Wiggly Double Bond
Custom Checkers and Fixers
R-group Bridge Error
Brackets
Creating a Configuration
Interfaces
MarvinSketch
Structure Checker Application
Structure Checker Editor
Structure Checker Command Line Application
JChem Cartridge
Structure Checker Developer's Guide
Introduction to Structure Checker API
Classes, interfaces and configuration
Implementing a new Structure Checker
Create Graphical User Interface for Checker Options
Implementing Fixers
Installation and System Requirements
Licensing
End User License Agreement (EULA)
Getting Help and Support
Checkers and Fixers
Abbreviated Group Checker
Absent Chiral Flag Checker
Alias Checker
Aromaticity Error Checker
Atom Map Checker
Atom Query Property Checker
Atom Value Checker
Attached Data Checker
Bond Angle Checker
Bond Length Checker
Chiral Flag Error Checker
Circular R-group Reference Checker
Coordination System Error Checker
Covalent Counterion Checker
Crossed Double Bond Checker
Empty Structure Checker
Explicit Hydrogen Checker
Explicit Lone Pairs Checker
Isotope Checker
Metallocene Error Checker
Missing Atom Map Checker
Missing R-group Reference Checker
Molecule Charge Checker
Multicenter Checker
Multicomponent Checker
OCR Error_old
Overlapping Atoms Checker
Overlapping Bonds Checker
Pseudo Atom Checker
Query Atom Checker
Query Bond Checker
Racemate Checker
Radical Checker
Rare Element Checker
R-atom Checker
Reaction Map Error Checker
R-group Attachment Error Checker
R-group Reference Error Checker
Ring Strain Error Checker
Solvent Checker
Star Atom Checker
Stereo Care Box Checker
Substructure Checker
Three Dimension Checker
Unbalanced Reaction Checker
Unused R-group Reference Checker
Valence Error Checker
Valence Property Checker
Wedge Error Checker
Wiggly Double Bond Checker
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