chemaxon.checkers

Class RgroupBridgeRatomChecker

java.lang.Object

chemaxon.checkers.AbstractStructureChecker

chemaxon.checkers.RgroupBridgeRatomChecker

All Implemented Interfaces:

StructureChecker, chemaxon.license.Licensable, PropertyChangeListener, Cloneable, EventListener

@Beta
public class RgroupBridgeRatomChecker
extends AbstractStructureChecker

Checker for R-atoms that can form an R-group bridge:

• One R-group can be involved in at most one bridge.
• Two R-atoms that represent a bridge must be in the scaffold or in the same R-group definition member.
• The R-group number that represents an R-group bridge cannot represent an ordinary R-group.

Since:

14.10.17.

Author:

Janos Kendi

Field Summary

Fields inherited from class chemaxon.checkers.AbstractStructureChecker

errorType, propertyChangeSupport

Fields inherited from interface chemaxon.checkers.StructureChecker

PROPERTY_KEY_VALID

Constructor Summary

Constructors

Constructor and Description
RgroupBridgeRatomChecker()

Method Summary

Methods

Modifier and Type	Method and Description
protected StructureCheckerResult	check1(Molecule mol) This method contains the current checking mechanism.

Methods inherited from class chemaxon.checkers.AbstractStructureChecker

addPropertyChangeListener, addPropertyChangeListener, check, clone, cloneItem, convertResult, equals, expandMolecule, getDescription, getDescriptor, getEditorClassName, getErrorCode, getErrorDescription, getErrorType, getHelpText, getIcon, getLocalMenuName, getName, hashCode, isAvailable, isLicensed, isValid, propertyChange, removePropertyChangeListener, removePropertyChangeListener, setDescription, setHelpText, setIcon, setLicenseEnvironment, setLocalMenuName, setMoreErrorMessage, setName, setNoErrorMessage, setOneErrorMessage, toString

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

RgroupBridgeRatomChecker

public RgroupBridgeRatomChecker()

Method Detail

check1

protected StructureCheckerResult check1(Molecule mol)

Description copied from class: AbstractStructureChecker

This method contains the current checking mechanism.

Specified by:

check1 in class AbstractStructureChecker

Parameters:

mol - the Molecule instance to be checked for problems

Returns:

a StructureCheckerResult which represents the problem or null if no problem found