chemaxon.checkers.result

Class SubstructureCheckerResult

java.lang.Object

chemaxon.checkers.result.DefaultStructureCheckerResult

chemaxon.checkers.result.SubstructureCheckerResult

All Implemented Interfaces:

StructureCheckerResult

public class SubstructureCheckerResult
extends DefaultStructureCheckerResult

Since:

JChem 5.5, Marvin 5.6

Version:

5.6

Author:

Attila Szabo

Constructor Summary

Constructors

Constructor and Description
SubstructureCheckerResult(StructureChecker source, List<MolAtom> atoms, List<MolBond> bonds, StructureCheckerErrorType errorType, Molecule molecule, String description, String name, String localMenuName, String helpText, Icon icon, List<int[]> theStructures, String areactionSmarts) Constructor which initialize all the properties.

Method Summary

Methods

Modifier and Type	Method and Description
boolean	equals(Object obj)
String	getReactionSmarts() Returns the reactionSmarts
List<int[]>	getStructures() Returns the structures
int	hashCode()

Methods inherited from class chemaxon.checkers.result.DefaultStructureCheckerResult

convert, getAtoms, getBonds, getDescription, getErrorCount, getErrorDescription, getErrorType, getHelpText, getIcon, getLocalMenuName, getMolecule, getName, getSource, setAtoms, setBonds, setMolecule, toString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

SubstructureCheckerResult

public SubstructureCheckerResult(StructureChecker source,
                         List<MolAtom> atoms,
                         List<MolBond> bonds,
                         StructureCheckerErrorType errorType,
                         Molecule molecule,
                         String description,
                         String name,
                         String localMenuName,
                         String helpText,
                         Icon icon,
                         List<int[]> theStructures,
                         String areactionSmarts)

Constructor which initialize all the properties.

Parameters:

source - is the StructureChecker instance which identified the problem

atoms - a List of MolAtom which contains the affected atoms of the problem

bonds - a List of MolBond which contains the affected bonds of the problem

errorType - is an instance of StructureCheckerErrorType which identifies the problem

molecule - is a Molecule instance which contains the described problem

description - is short information about the problem

name - is the name of the checker which found the described problem

localMenuName - is a String which should be shown in the local menu of Marvin Sketch

helpText - is help message for the problem

icon - is an instance of Icon which will be shown in Marvin Sketch checker dialogs

theStructures - the a two dimension integer array which represents the substructures found in the molecule

areactionSmarts - the reactant -> product smarts

Method Detail

getStructures

public List<int[]> getStructures()

Returns the structures

Returns:

the structures

getReactionSmarts

public String getReactionSmarts()

Returns the reactionSmarts

Returns:

the reactionSmarts

hashCode

public int hashCode()

Overrides:

hashCode in class DefaultStructureCheckerResult

equals

public boolean equals(Object obj)

Overrides:

equals in class DefaultStructureCheckerResult