chemaxon.formats

Class MolConverter.Builder

java.lang.Object

chemaxon.formats.MolConverter.Builder

Direct Known Subclasses:

MolConverter.Options

Enclosing class:

MolConverter

public static class MolConverter.Builder
extends Object

MolConverter builder.

Since:

Marvin 5.2.3, 05/28/2009

Author:

Peter Csizmadia

Constructor Summary

Constructors

Constructor and Description
MolConverter.Builder() Constructs an empty Builder object.

Method Summary

Methods

Modifier and Type	Method and Description
void	addInput(File f, String opts) Adds an input file.
void	addInput(InputStream is, String opts) Adds an input stream.
void	addInput(String fname, String opts) Adds an input file.
MolConverter	build() Builds the MolConverter.
MolConverter.Builder	clean(int dim) Enables cleaning.
MolConverter.Builder	clean(int dim, String opts) Enables cleaning.
void	clear() Clears all settings.
protected Object	clone() Clones the object.
int	getInputCount() Gets the number of input files/streams.
void	setEncodings(String enc) Sets the input and/or output encoding.
void	setFields(String[] fields) Sets the included fields to be shown in a table.
void	setOutput(File f, String fmtopts) Sets the output file.
void	setOutput(OutputStream out, String fmtopts) Sets the output stream.
void	setOutput(String fname, String fmtopts) Sets the output file.
void	setOutputFlags(int outflags) Sets output flags.

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MolConverter.Builder

public MolConverter.Builder()

Constructs an empty Builder object.

Method Detail

build

public MolConverter build()
                   throws MolFormatException,
                          MolExportException,
                          IOException,
                          IllegalArgumentException

Builds the MolConverter.

Returns:

the new MolConverter

Throws:

MolFormatException - If the molecule file is in a format that cannot be read

MolExportException - If the molecule cannot be exported in the specified format

IOException - If I/O error occured when determining the file format.

IllegalArgumentException - Invalid format string (fmt).

clear

public void clear()

Clears all settings.

addInput

public void addInput(InputStream is,
            String opts)

Adds an input stream.

Parameters:

is - the input stream

opts - import options or null

addInput

public void addInput(File f,
            String opts)

Adds an input file.

Parameters:

f - the file

opts - import options or null

addInput

public void addInput(String fname,
            String opts)

Adds an input file.

Parameters:

fname - the file's path

opts - import options or null

getInputCount

public int getInputCount()

Gets the number of input files/streams.

Returns:

the number of input files/streams

setOutput

public void setOutput(OutputStream out,
             String fmtopts)

Sets the output stream.

Parameters:

out - the output stream

fmtopts - file format and options (or null)

setOutput

public void setOutput(File f,
             String fmtopts)

Sets the output file.

Parameters:

f - the output file

fmtopts - file format and options (or null)

setOutput

public void setOutput(String fname,
             String fmtopts)

Sets the output file.

Parameters:

fname - the output file's path

fmtopts - file format and options (or null)

setOutputFlags

public void setOutputFlags(int outflags)

Sets output flags.

Parameters:

outflags - output flags, a combination of MolExporter.TEXT and MolExporter.MULTIPLE

setEncodings

public void setEncodings(String enc)

Sets the input and/or output encoding.

Parameters:

enc - the input and/or output encodings in INCHARSET..OUTCHARSET format

setFields

public void setFields(String[] fields)

Sets the included fields to be shown in a table.

Parameters:

fields - the fields

clean

public MolConverter.Builder clean(int dim)

Enables cleaning.

Parameters:

dim - cleaning dimension, 2 or 3

Returns:

this builder object

Since:

Marvin 5.2.4, 07/07/2009

clean

public MolConverter.Builder clean(int dim,
                         String opts)

Enables cleaning.

Parameters:

dim - cleaning dimension, 2 or 3

opts - cleaning options

Returns:

this builder object

Since:

Marvin 5.2.4, 07/07/2009

clone

protected Object clone()

Clones the object.

Overrides:

clone in class Object