com.chemaxon.calculations.stereoanal.stereocenters

Class AtomSelection

java.lang.Object

com.chemaxon.calculations.stereoanal.stereocenters.AtomSelection

@Beta
public class AtomSelection
extends Object

Selection which contains atom indexes.

Please note that this class is marked with @Beta annotation, so it can be subject of incompatible changes or removal in later releases.

Since:

Marvin 6.2

Author:

Laszlo Antal

Constructor Summary

Constructors

Constructor and Description
AtomSelection(int[] primaryIndexes, int[] secondaryIndexes) Deprecated.
AtomSelection(int primaryIndex, int[] secondaryIndexes) Deprecated.
AtomSelection(List<Integer> primaryIndexes, List<Integer> secondaryIndexes) Constructs an AtomSelection from lists.

Method Summary

Methods

Modifier and Type	Method and Description
List<Integer>	getPrimaryIndexes() Gets the primary indexes.
List<Integer>	getSecondaryIndexes() Gets the secondary indexes.
int[]	primaryAtomIndexes() Deprecated.
int[]	secondaryAtomIndexes() Deprecated.
String	toString() Creates a string representation.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

AtomSelection

public AtomSelection(List<Integer> primaryIndexes,
             List<Integer> secondaryIndexes)

Constructs an AtomSelection from lists.

Parameters:

primaryIndexes - primary indexes

secondaryIndexes - secondary indexes

AtomSelection

@Deprecated
public AtomSelection(int[] primaryIndexes,
                        int[] secondaryIndexes)

Deprecated.

Constructs an AtomSelection from arrays.

Parameters:

primaryIndexes - primary indexes

secondaryIndexes - secondary indexes

AtomSelection

@Deprecated
public AtomSelection(int primaryIndex,
                        int[] secondaryIndexes)

Deprecated.

Constructs an AtomSelection.

Parameters:

primaryIndex - primary index

secondaryIndexes - secondary indexes

Method Detail

getPrimaryIndexes

public List<Integer> getPrimaryIndexes()

Gets the primary indexes.

Returns:

list of primary indexes

getSecondaryIndexes

public List<Integer> getSecondaryIndexes()

Gets the secondary indexes.

Returns:

list of secondary indexes

primaryAtomIndexes

@Deprecated
public int[] primaryAtomIndexes()

Deprecated.

Gets the primary indexes.

Returns:

a copy of primary indexes array

secondaryAtomIndexes

@Deprecated
public int[] secondaryAtomIndexes()

Deprecated.

Gets the secondary indexes.

Returns:

a copy of secondary indexes array

toString

public String toString()

Creates a string representation.

Overrides:

toString in class Object

Returns:

string